SG-APSIC1123: Diagnostic and infection prevention and control (IPC) performance of rapid polymerase chain reaction (PCR) compared to conventional culture PCR methods for detecting carbapenemase-producing organisms (CPOs)
نویسندگان
چکیده
Objectives: In this study, we compared the performance of a rapid polymerase chain reaction (PCR) method in detecting carbapenemase-producing organisms (CPOs) and its impact on infection prevention control (IPC) measures with culture PCR method. Methods: All patients requiring CPO screening were included. Rectal swabs collected double rayon (Copan 139C). They simultaneously analyzed for presence CPOs using assay (Xpert Carba-R assay, Cepheid, Sunnyvale, CA) culture–PCR (ChromID CARBA-SMART, bioMerieux, Marcy-l’Etoile, France). For only colored colonies (ie, Enterobacterales) evaluated according to prevailing institutional protocol. We tracked time detection. Using positivity from either or as gold standard, calculated sensitivity specificity both tests. number epidemiologically linked contacts generated when first test results known. prospectively followed ward census identify putative additional by later known result. Contacts who shared same (with overlapping time) patients. Results: Between April 2019 June 2020, detected 316 (1.3%) 24,514 samples ( bla OXA48, N = 211; NDM, 51; IMI, 21; IMP, 10; KPC, 9; mixed genotypes, 14). The 605(2.5%) 266; 161; 99; VIM, 29; 15; 35). direct methods 94.2% (95% CI, 92.1%–95.8%) 43.5% 39.6%–47.4%), respectively. Both tests had 100% specificity. median times detection 3–4 hours 4 days, Compared PCR, 7,415 it also tested positive an 23,135 negative CPOs. Conclusions: our was more sensitive, identified faster, fewer than
منابع مشابه
Application of culture and polymerase chain reaction (PCR) methods for isolation and identification of Mycoplasma synoviae on broiler chicken farms
Mycoplasma synoviae (M. synoviae) is a major worldwide poultry pathogen that causes serious economic losses in the poultry industry. This study was designed to detect M. synoviae through culture isolation and polymerase chain reaction (PCR) assay to demonstrated the involvement of M. synoviae infection in trachea and the lung/air sac samples taken from commercial broiler chicken farms in 3 m...
متن کاملPolymerase Chain Reaction (PCR)
The polymerase chain reaction (PCR) is a powerful and widely used technique that has greatly advanced our ability to analyze genes. Genomic deoxyribonucleic acid (DNA) present in cells contains many thousands of genes. This makes it difficult to isolate and analyze any individual gene. PCR allows specific DNA sequences, usually corresponding to genes or parts of genes, to be copied from genomic...
متن کاملA Rapid and Sensitive Detection of Aflatoxin-producing Fungus Using an Optimized Polymerase Chain Reaction (PCR)
Aflatoxin B1 (AFB1) is produced by Aspergillus flavus growing in feedstuffs. Early detection of maize contamination by aflatoxigenic fungi is advantageous since aflatoxins exert adverse health effects. In this study, we report the development of an optimized conventional PCR for AFB1 detection and a rapid, sensitive and simple screening Real-time PCR (qPCR) with SYBR Green and two pairs of prim...
متن کاملConventional multiplex polymerase chain reaction ( PCR ) versus real - time PCR for species - specific meat
Simple and reliable conventional multiplex-polymerase chain reaction (multiplex-PCR) as well as real-time PCR approaches for the partial-length cytochrome b or cyt b gene of mitochondrial DNA (mtDNA) were compared to identify seven animal species for the authenticity of low non Halal (pig, dog, cat and donkey) and high value Halal (cattle, sheep and goat) meats. Either analysis indicated the su...
متن کاملDiagnostic RAS mutation analysis by polymerase chain reaction (PCR)
RAS mutation analysis is an important companion diagnostic test. Treatment of colorectal cancer with anti-Epidermal Growth Factor Receptor (EGFR) therapy requires demonstration of RAS mutation status (both KRAS and NRAS), and it is good practice to include BRAF. In Non-Small Cell Lung Cancer (NSCLC) and melanoma, assessment of RAS mutation status can be helpful in triaging patient samples for m...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Antimicrobial stewardship & healthcare epidemiology
سال: 2023
ISSN: ['2732-494X']
DOI: https://doi.org/10.1017/ash.2023.78